Lab Note #4 Second experiment
Since the previous result was not clear and cells did not get reduced as much as I thought, I decided to the second experiment by putting an increased concentration of PLA2 and 5FU on colorectal cells.
Method:
1. I took plates with cells(WIDR and HCT15) out of a culture medium.
2. I got rid of liquid media using a suction machine.
3. I put 500ul of TE buffer so that cells on the bottom of the plates float. After I put them on the centrifuge I waited for 5 minutes. (If the cells are on TE buffer too long, cells can die.)
4. After 5 minutes, I slightly shook the plate with TE buffer and cells so that the cells are detached from the bottom of the plates.
5. I put them on two 1.5ml tubes.
6. I put the tubes on a centrifuge that spin in a speed of 7500 rpm for 2 minutes. Then I can saw cells on the bottom of the tube separated from TE buffer.
7. I sucked TE buffer carefully so that the cells don't get sucked up together.
8. I put 200ul of RPMI and did a pipetting so that cells are mixed with RPMI evenly
9. I put RPMI + cells on 15ml tube (I made the liquid flow on the wall)
10. With a big pipette, I put 7 ml of RPMI and shook it up and down slightly.
11. I put 500ul of solution on a 24 wells plate.
12. On the same 24 wells plate, I put PLA2 and 5FU according to the following concentration.
|
|
1 |
2 |
3 |
4 |
5 |
6 |
|
PLA2 |
1500u/ml |
0 |
5 |
10 |
20 |
40 |
50 |
u/ml |
|
|
0 |
1.65 |
3.3 |
6.6 |
13.2 |
16.5 |
Ul |
5FU |
10mg/ml |
0 |
200 |
400 |
600 |
800 |
|
uM |
|
|
0 |
1.3 |
2.6 |
3.9 |
5.2 |
6.5 |
ul |
After 72 hours, I checked the result using the same cell counting machine.
|
HCT15 |
|
|
|
PLA2 |
0 |
5 |
10 |
20 |
Live Cell |
2.20E+06 |
8.70E+05 |
1.07E+06 |
1.37E+06 |
Viability |
93.3 |
93.2 |
94.8 |
96.9 |
|
HCT15 |
|
|
|
5FU |
0 |
200 |
400 |
600 |
Live Cell |
2.12E+06 |
2.02E+06 |
1.65E+06 |
1.49E+06 |
Viability |
95.5 |
96.3 |
95.7 |
92 |
|
WIDR |
|
|
|
PLA2 |
0 |
5 |
10 |
20 |
Live Cell |
2.61E+06 |
3.55E+06 |
2.67E+06 |
2.44E+06 |
Viability |
98.8 |
97.4 |
95.8 |
96.1 |
|
WIDR |
|
|
|
5FU |
0 |
200 |
400 |
600 |
Live Cell |
2.15E+06 |
2.75E+05 |
5.70E+05 |
5.70E+05 |
Viability |
97.6 |
80.6 |
86 |
86 |
Interpretation:
Half Life:
-22.3709
1709.09
10.60117
-824.385
I got minus half-lives, which proves that I could not get the result I wanted.
So I decided to do the another experiment.
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